scvi.model.utils.get_minified_adata_scrna

scvi.model.utils.get_minified_adata_scrna#

scvi.model.utils.get_minified_adata_scrna(adata, minified_data_type)[source]#

Returns a minified adata that works for most scrna models (such as SCVI, SCANVI).

Parameters:

  • adata (AnnData) – Original adata, of which we to create a minified version.

  • minified_data_type (Literal['latent_posterior_parameters']) – How to minify the data.

Return type:

AnnData

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