scvi.external.POISSONVI
=======================

.. currentmodule:: scvi.external

.. add toctree option to make autodoc generate the pages

.. autoclass:: POISSONVI



Attributes table
~~~~~~~~~~~~~~~~~~

.. autosummary::

    ~scvi.external.POISSONVI.adata
    ~scvi.external.POISSONVI.adata_manager
    ~scvi.external.POISSONVI.device
    ~scvi.external.POISSONVI.history
    ~scvi.external.POISSONVI.is_trained
    ~scvi.external.POISSONVI.summary_string
    ~scvi.external.POISSONVI.test_indices
    ~scvi.external.POISSONVI.train_indices
    ~scvi.external.POISSONVI.validation_indices





Methods table
~~~~~~~~~~~~~

.. autosummary::

    ~scvi.external.POISSONVI.convert_legacy_save
    ~scvi.external.POISSONVI.deregister_manager
    ~scvi.external.POISSONVI.differential_accessibility
    ~scvi.external.POISSONVI.differential_expression
    ~scvi.external.POISSONVI.get_accessibility_estimates
    ~scvi.external.POISSONVI.get_anndata_manager
    ~scvi.external.POISSONVI.get_elbo
    ~scvi.external.POISSONVI.get_feature_correlation_matrix
    ~scvi.external.POISSONVI.get_from_registry
    ~scvi.external.POISSONVI.get_latent_library_size
    ~scvi.external.POISSONVI.get_latent_representation
    ~scvi.external.POISSONVI.get_library_size_factors
    ~scvi.external.POISSONVI.get_likelihood_parameters
    ~scvi.external.POISSONVI.get_marginal_ll
    ~scvi.external.POISSONVI.get_normalized_expression
    ~scvi.external.POISSONVI.get_reconstruction_error
    ~scvi.external.POISSONVI.get_region_factors
    ~scvi.external.POISSONVI.load
    ~scvi.external.POISSONVI.load_query_data
    ~scvi.external.POISSONVI.load_registry
    ~scvi.external.POISSONVI.posterior_predictive_sample
    ~scvi.external.POISSONVI.prepare_query_anndata
    ~scvi.external.POISSONVI.prepare_query_mudata
    ~scvi.external.POISSONVI.register_manager
    ~scvi.external.POISSONVI.save
    ~scvi.external.POISSONVI.setup_anndata
    ~scvi.external.POISSONVI.to_device
    ~scvi.external.POISSONVI.train
    ~scvi.external.POISSONVI.view_anndata_setup
    ~scvi.external.POISSONVI.view_setup_args





Attributes
~~~~~~~~~~~



.. autoattribute:: POISSONVI.adata

.. autoattribute:: POISSONVI.adata_manager

.. autoattribute:: POISSONVI.device

.. autoattribute:: POISSONVI.history

.. autoattribute:: POISSONVI.is_trained

.. autoattribute:: POISSONVI.summary_string

.. autoattribute:: POISSONVI.test_indices

.. autoattribute:: POISSONVI.train_indices

.. autoattribute:: POISSONVI.validation_indices






Methods
~~~~~~~



.. automethod:: POISSONVI.convert_legacy_save

.. automethod:: POISSONVI.deregister_manager

.. automethod:: POISSONVI.differential_accessibility

.. automethod:: POISSONVI.differential_expression

.. automethod:: POISSONVI.get_accessibility_estimates

.. automethod:: POISSONVI.get_anndata_manager

.. automethod:: POISSONVI.get_elbo

.. automethod:: POISSONVI.get_feature_correlation_matrix

.. automethod:: POISSONVI.get_from_registry

.. automethod:: POISSONVI.get_latent_library_size

.. automethod:: POISSONVI.get_latent_representation

.. automethod:: POISSONVI.get_library_size_factors

.. automethod:: POISSONVI.get_likelihood_parameters

.. automethod:: POISSONVI.get_marginal_ll

.. automethod:: POISSONVI.get_normalized_expression

.. automethod:: POISSONVI.get_reconstruction_error

.. automethod:: POISSONVI.get_region_factors

.. automethod:: POISSONVI.load

.. automethod:: POISSONVI.load_query_data

.. automethod:: POISSONVI.load_registry

.. automethod:: POISSONVI.posterior_predictive_sample

.. automethod:: POISSONVI.prepare_query_anndata

.. automethod:: POISSONVI.prepare_query_mudata

.. automethod:: POISSONVI.register_manager

.. automethod:: POISSONVI.save

.. automethod:: POISSONVI.setup_anndata

.. automethod:: POISSONVI.to_device

.. automethod:: POISSONVI.train

.. automethod:: POISSONVI.view_anndata_setup

.. automethod:: POISSONVI.view_setup_args