scvi.external.SCBASSET
======================

.. currentmodule:: scvi.external

.. add toctree option to make autodoc generate the pages

.. autoclass:: SCBASSET



Attributes table
~~~~~~~~~~~~~~~~~~

.. autosummary::

    ~scvi.external.SCBASSET.DEFAULT_MOTIF_DIR
    ~scvi.external.SCBASSET.MOTIF_URLS
    ~scvi.external.SCBASSET.adata
    ~scvi.external.SCBASSET.adata_manager
    ~scvi.external.SCBASSET.device
    ~scvi.external.SCBASSET.history
    ~scvi.external.SCBASSET.is_trained
    ~scvi.external.SCBASSET.summary_string
    ~scvi.external.SCBASSET.test_indices
    ~scvi.external.SCBASSET.train_indices
    ~scvi.external.SCBASSET.validation_indices





Methods table
~~~~~~~~~~~~~

.. autosummary::

    ~scvi.external.SCBASSET.convert_legacy_save
    ~scvi.external.SCBASSET.deregister_manager
    ~scvi.external.SCBASSET.get_anndata_manager
    ~scvi.external.SCBASSET.get_cell_bias
    ~scvi.external.SCBASSET.get_from_registry
    ~scvi.external.SCBASSET.get_latent_representation
    ~scvi.external.SCBASSET.get_tf_activity
    ~scvi.external.SCBASSET.load
    ~scvi.external.SCBASSET.load_registry
    ~scvi.external.SCBASSET.register_manager
    ~scvi.external.SCBASSET.save
    ~scvi.external.SCBASSET.setup_anndata
    ~scvi.external.SCBASSET.to_device
    ~scvi.external.SCBASSET.train
    ~scvi.external.SCBASSET.view_anndata_setup
    ~scvi.external.SCBASSET.view_setup_args





Attributes
~~~~~~~~~~~



.. autoattribute:: SCBASSET.DEFAULT_MOTIF_DIR

.. autoattribute:: SCBASSET.MOTIF_URLS

.. autoattribute:: SCBASSET.adata

.. autoattribute:: SCBASSET.adata_manager

.. autoattribute:: SCBASSET.device

.. autoattribute:: SCBASSET.history

.. autoattribute:: SCBASSET.is_trained

.. autoattribute:: SCBASSET.summary_string

.. autoattribute:: SCBASSET.test_indices

.. autoattribute:: SCBASSET.train_indices

.. autoattribute:: SCBASSET.validation_indices






Methods
~~~~~~~



.. automethod:: SCBASSET.convert_legacy_save

.. automethod:: SCBASSET.deregister_manager

.. automethod:: SCBASSET.get_anndata_manager

.. automethod:: SCBASSET.get_cell_bias

.. automethod:: SCBASSET.get_from_registry

.. automethod:: SCBASSET.get_latent_representation

.. automethod:: SCBASSET.get_tf_activity

.. automethod:: SCBASSET.load

.. automethod:: SCBASSET.load_registry

.. automethod:: SCBASSET.register_manager

.. automethod:: SCBASSET.save

.. automethod:: SCBASSET.setup_anndata

.. automethod:: SCBASSET.to_device

.. automethod:: SCBASSET.train

.. automethod:: SCBASSET.view_anndata_setup

.. automethod:: SCBASSET.view_setup_args