scvi.external.Tangram
=====================

.. currentmodule:: scvi.external

.. add toctree option to make autodoc generate the pages

.. autoclass:: Tangram



Attributes table
~~~~~~~~~~~~~~~~~~

.. autosummary::

    ~scvi.external.Tangram.adata
    ~scvi.external.Tangram.adata_manager
    ~scvi.external.Tangram.device
    ~scvi.external.Tangram.history
    ~scvi.external.Tangram.is_trained
    ~scvi.external.Tangram.summary_string
    ~scvi.external.Tangram.test_indices
    ~scvi.external.Tangram.train_indices
    ~scvi.external.Tangram.validation_indices





Methods table
~~~~~~~~~~~~~

.. autosummary::

    ~scvi.external.Tangram.convert_legacy_save
    ~scvi.external.Tangram.deregister_manager
    ~scvi.external.Tangram.get_anndata_manager
    ~scvi.external.Tangram.get_from_registry
    ~scvi.external.Tangram.get_mapper_matrix
    ~scvi.external.Tangram.load
    ~scvi.external.Tangram.load_registry
    ~scvi.external.Tangram.project_cell_annotations
    ~scvi.external.Tangram.project_genes
    ~scvi.external.Tangram.register_manager
    ~scvi.external.Tangram.save
    ~scvi.external.Tangram.setup_anndata
    ~scvi.external.Tangram.setup_mudata
    ~scvi.external.Tangram.to_device
    ~scvi.external.Tangram.train
    ~scvi.external.Tangram.view_anndata_setup
    ~scvi.external.Tangram.view_setup_args





Attributes
~~~~~~~~~~~



.. autoattribute:: Tangram.adata

.. autoattribute:: Tangram.adata_manager

.. autoattribute:: Tangram.device

.. autoattribute:: Tangram.history

.. autoattribute:: Tangram.is_trained

.. autoattribute:: Tangram.summary_string

.. autoattribute:: Tangram.test_indices

.. autoattribute:: Tangram.train_indices

.. autoattribute:: Tangram.validation_indices






Methods
~~~~~~~



.. automethod:: Tangram.convert_legacy_save

.. automethod:: Tangram.deregister_manager

.. automethod:: Tangram.get_anndata_manager

.. automethod:: Tangram.get_from_registry

.. automethod:: Tangram.get_mapper_matrix

.. automethod:: Tangram.load

.. automethod:: Tangram.load_registry

.. automethod:: Tangram.project_cell_annotations

.. automethod:: Tangram.project_genes

.. automethod:: Tangram.register_manager

.. automethod:: Tangram.save

.. automethod:: Tangram.setup_anndata

.. automethod:: Tangram.setup_mudata

.. automethod:: Tangram.to_device

.. automethod:: Tangram.train

.. automethod:: Tangram.view_anndata_setup

.. automethod:: Tangram.view_setup_args