scvi.model.LinearSCVI
=====================

.. currentmodule:: scvi.model

.. add toctree option to make autodoc generate the pages

.. autoclass:: LinearSCVI



Attributes table
~~~~~~~~~~~~~~~~~~

.. autosummary::

    ~scvi.model.LinearSCVI.adata
    ~scvi.model.LinearSCVI.adata_manager
    ~scvi.model.LinearSCVI.device
    ~scvi.model.LinearSCVI.history
    ~scvi.model.LinearSCVI.is_trained
    ~scvi.model.LinearSCVI.summary_string
    ~scvi.model.LinearSCVI.test_indices
    ~scvi.model.LinearSCVI.train_indices
    ~scvi.model.LinearSCVI.validation_indices





Methods table
~~~~~~~~~~~~~

.. autosummary::

    ~scvi.model.LinearSCVI.convert_legacy_save
    ~scvi.model.LinearSCVI.deregister_manager
    ~scvi.model.LinearSCVI.differential_expression
    ~scvi.model.LinearSCVI.get_anndata_manager
    ~scvi.model.LinearSCVI.get_elbo
    ~scvi.model.LinearSCVI.get_feature_correlation_matrix
    ~scvi.model.LinearSCVI.get_from_registry
    ~scvi.model.LinearSCVI.get_latent_library_size
    ~scvi.model.LinearSCVI.get_latent_representation
    ~scvi.model.LinearSCVI.get_likelihood_parameters
    ~scvi.model.LinearSCVI.get_loadings
    ~scvi.model.LinearSCVI.get_marginal_ll
    ~scvi.model.LinearSCVI.get_normalized_expression
    ~scvi.model.LinearSCVI.get_reconstruction_error
    ~scvi.model.LinearSCVI.load
    ~scvi.model.LinearSCVI.load_registry
    ~scvi.model.LinearSCVI.posterior_predictive_sample
    ~scvi.model.LinearSCVI.register_manager
    ~scvi.model.LinearSCVI.save
    ~scvi.model.LinearSCVI.setup_anndata
    ~scvi.model.LinearSCVI.to_device
    ~scvi.model.LinearSCVI.train
    ~scvi.model.LinearSCVI.view_anndata_setup
    ~scvi.model.LinearSCVI.view_setup_args





Attributes
~~~~~~~~~~~



.. autoattribute:: LinearSCVI.adata

.. autoattribute:: LinearSCVI.adata_manager

.. autoattribute:: LinearSCVI.device

.. autoattribute:: LinearSCVI.history

.. autoattribute:: LinearSCVI.is_trained

.. autoattribute:: LinearSCVI.summary_string

.. autoattribute:: LinearSCVI.test_indices

.. autoattribute:: LinearSCVI.train_indices

.. autoattribute:: LinearSCVI.validation_indices






Methods
~~~~~~~



.. automethod:: LinearSCVI.convert_legacy_save

.. automethod:: LinearSCVI.deregister_manager

.. automethod:: LinearSCVI.differential_expression

.. automethod:: LinearSCVI.get_anndata_manager

.. automethod:: LinearSCVI.get_elbo

.. automethod:: LinearSCVI.get_feature_correlation_matrix

.. automethod:: LinearSCVI.get_from_registry

.. automethod:: LinearSCVI.get_latent_library_size

.. automethod:: LinearSCVI.get_latent_representation

.. automethod:: LinearSCVI.get_likelihood_parameters

.. automethod:: LinearSCVI.get_loadings

.. automethod:: LinearSCVI.get_marginal_ll

.. automethod:: LinearSCVI.get_normalized_expression

.. automethod:: LinearSCVI.get_reconstruction_error

.. automethod:: LinearSCVI.load

.. automethod:: LinearSCVI.load_registry

.. automethod:: LinearSCVI.posterior_predictive_sample

.. automethod:: LinearSCVI.register_manager

.. automethod:: LinearSCVI.save

.. automethod:: LinearSCVI.setup_anndata

.. automethod:: LinearSCVI.to_device

.. automethod:: LinearSCVI.train

.. automethod:: LinearSCVI.view_anndata_setup

.. automethod:: LinearSCVI.view_setup_args