scvi.external.CellAssign
========================

.. currentmodule:: scvi.external

.. add toctree option to make autodoc generate the pages

.. autoclass:: CellAssign



Attributes table
~~~~~~~~~~~~~~~~~~

.. autosummary::

    ~scvi.external.CellAssign.adata
    ~scvi.external.CellAssign.adata_manager
    ~scvi.external.CellAssign.device
    ~scvi.external.CellAssign.get_normalized_function_name
    ~scvi.external.CellAssign.history
    ~scvi.external.CellAssign.is_trained
    ~scvi.external.CellAssign.registry
    ~scvi.external.CellAssign.summary_string
    ~scvi.external.CellAssign.test_indices
    ~scvi.external.CellAssign.train_indices
    ~scvi.external.CellAssign.validation_indices





Methods table
~~~~~~~~~~~~~

.. autosummary::

    ~scvi.external.CellAssign.convert_legacy_save
    ~scvi.external.CellAssign.data_registry
    ~scvi.external.CellAssign.deregister_manager
    ~scvi.external.CellAssign.differential_expression
    ~scvi.external.CellAssign.get_anndata_manager
    ~scvi.external.CellAssign.get_feature_correlation_matrix
    ~scvi.external.CellAssign.get_from_registry
    ~scvi.external.CellAssign.get_latent_library_size
    ~scvi.external.CellAssign.get_likelihood_parameters
    ~scvi.external.CellAssign.get_normalized_expression
    ~scvi.external.CellAssign.get_setup_arg
    ~scvi.external.CellAssign.get_state_registry
    ~scvi.external.CellAssign.get_var_names
    ~scvi.external.CellAssign.load
    ~scvi.external.CellAssign.load_registry
    ~scvi.external.CellAssign.posterior_predictive_sample
    ~scvi.external.CellAssign.predict
    ~scvi.external.CellAssign.register_manager
    ~scvi.external.CellAssign.save
    ~scvi.external.CellAssign.setup_anndata
    ~scvi.external.CellAssign.to_device
    ~scvi.external.CellAssign.train
    ~scvi.external.CellAssign.transfer_fields
    ~scvi.external.CellAssign.update_setup_method_args
    ~scvi.external.CellAssign.view_anndata_setup
    ~scvi.external.CellAssign.view_registry
    ~scvi.external.CellAssign.view_setup_args
    ~scvi.external.CellAssign.view_setup_method_args





Attributes
~~~~~~~~~~~



.. autoattribute:: CellAssign.adata

.. autoattribute:: CellAssign.adata_manager

.. autoattribute:: CellAssign.device

.. autoattribute:: CellAssign.get_normalized_function_name

.. autoattribute:: CellAssign.history

.. autoattribute:: CellAssign.is_trained

.. autoattribute:: CellAssign.registry

.. autoattribute:: CellAssign.summary_string

.. autoattribute:: CellAssign.test_indices

.. autoattribute:: CellAssign.train_indices

.. autoattribute:: CellAssign.validation_indices






Methods
~~~~~~~



.. automethod:: CellAssign.convert_legacy_save

.. automethod:: CellAssign.data_registry

.. automethod:: CellAssign.deregister_manager

.. automethod:: CellAssign.differential_expression

.. automethod:: CellAssign.get_anndata_manager

.. automethod:: CellAssign.get_feature_correlation_matrix

.. automethod:: CellAssign.get_from_registry

.. automethod:: CellAssign.get_latent_library_size

.. automethod:: CellAssign.get_likelihood_parameters

.. automethod:: CellAssign.get_normalized_expression

.. automethod:: CellAssign.get_setup_arg

.. automethod:: CellAssign.get_state_registry

.. automethod:: CellAssign.get_var_names

.. automethod:: CellAssign.load

.. automethod:: CellAssign.load_registry

.. automethod:: CellAssign.posterior_predictive_sample

.. automethod:: CellAssign.predict

.. automethod:: CellAssign.register_manager

.. automethod:: CellAssign.save

.. automethod:: CellAssign.setup_anndata

.. automethod:: CellAssign.to_device

.. automethod:: CellAssign.train

.. automethod:: CellAssign.transfer_fields

.. automethod:: CellAssign.update_setup_method_args

.. automethod:: CellAssign.view_anndata_setup

.. automethod:: CellAssign.view_registry

.. automethod:: CellAssign.view_setup_args

.. automethod:: CellAssign.view_setup_method_args