scvi.external.MRVI
==================

.. currentmodule:: scvi.external

.. add toctree option to make autodoc generate the pages

.. autoclass:: MRVI



Attributes table
~~~~~~~~~~~~~~~~~~

.. autosummary::

    ~scvi.external.MRVI.adata
    ~scvi.external.MRVI.adata_manager
    ~scvi.external.MRVI.device
    ~scvi.external.MRVI.get_normalized_function_name
    ~scvi.external.MRVI.history
    ~scvi.external.MRVI.is_trained
    ~scvi.external.MRVI.registry
    ~scvi.external.MRVI.summary_string
    ~scvi.external.MRVI.test_indices
    ~scvi.external.MRVI.train_indices
    ~scvi.external.MRVI.validation_indices





Methods table
~~~~~~~~~~~~~

.. autosummary::

    ~scvi.external.MRVI.compute_local_statistics
    ~scvi.external.MRVI.convert_legacy_save
    ~scvi.external.MRVI.data_registry
    ~scvi.external.MRVI.deregister_manager
    ~scvi.external.MRVI.differential_abundance
    ~scvi.external.MRVI.differential_expression
    ~scvi.external.MRVI.get_aggregated_posterior
    ~scvi.external.MRVI.get_anndata_manager
    ~scvi.external.MRVI.get_from_registry
    ~scvi.external.MRVI.get_latent_representation
    ~scvi.external.MRVI.get_local_sample_distances
    ~scvi.external.MRVI.get_local_sample_representation
    ~scvi.external.MRVI.get_normalized_expression
    ~scvi.external.MRVI.get_outlier_cell_sample_pairs
    ~scvi.external.MRVI.get_setup_arg
    ~scvi.external.MRVI.get_state_registry
    ~scvi.external.MRVI.get_var_names
    ~scvi.external.MRVI.load
    ~scvi.external.MRVI.load_registry
    ~scvi.external.MRVI.register_manager
    ~scvi.external.MRVI.save
    ~scvi.external.MRVI.setup_anndata
    ~scvi.external.MRVI.to_device
    ~scvi.external.MRVI.train
    ~scvi.external.MRVI.transfer_fields
    ~scvi.external.MRVI.update_sample_info
    ~scvi.external.MRVI.update_setup_method_args
    ~scvi.external.MRVI.view_anndata_setup
    ~scvi.external.MRVI.view_registry
    ~scvi.external.MRVI.view_setup_args
    ~scvi.external.MRVI.view_setup_method_args





Attributes
~~~~~~~~~~~



.. autoattribute:: MRVI.adata

.. autoattribute:: MRVI.adata_manager

.. autoattribute:: MRVI.device

.. autoattribute:: MRVI.get_normalized_function_name

.. autoattribute:: MRVI.history

.. autoattribute:: MRVI.is_trained

.. autoattribute:: MRVI.registry

.. autoattribute:: MRVI.summary_string

.. autoattribute:: MRVI.test_indices

.. autoattribute:: MRVI.train_indices

.. autoattribute:: MRVI.validation_indices






Methods
~~~~~~~



.. automethod:: MRVI.compute_local_statistics

.. automethod:: MRVI.convert_legacy_save

.. automethod:: MRVI.data_registry

.. automethod:: MRVI.deregister_manager

.. automethod:: MRVI.differential_abundance

.. automethod:: MRVI.differential_expression

.. automethod:: MRVI.get_aggregated_posterior

.. automethod:: MRVI.get_anndata_manager

.. automethod:: MRVI.get_from_registry

.. automethod:: MRVI.get_latent_representation

.. automethod:: MRVI.get_local_sample_distances

.. automethod:: MRVI.get_local_sample_representation

.. automethod:: MRVI.get_normalized_expression

.. automethod:: MRVI.get_outlier_cell_sample_pairs

.. automethod:: MRVI.get_setup_arg

.. automethod:: MRVI.get_state_registry

.. automethod:: MRVI.get_var_names

.. automethod:: MRVI.load

.. automethod:: MRVI.load_registry

.. automethod:: MRVI.register_manager

.. automethod:: MRVI.save

.. automethod:: MRVI.setup_anndata

.. automethod:: MRVI.to_device

.. automethod:: MRVI.train

.. automethod:: MRVI.transfer_fields

.. automethod:: MRVI.update_sample_info

.. automethod:: MRVI.update_setup_method_args

.. automethod:: MRVI.view_anndata_setup

.. automethod:: MRVI.view_registry

.. automethod:: MRVI.view_setup_args

.. automethod:: MRVI.view_setup_method_args