scvi.model.MULTIVI
==================

.. currentmodule:: scvi.model

.. add toctree option to make autodoc generate the pages

.. autoclass:: MULTIVI



Attributes table
~~~~~~~~~~~~~~~~~~

.. autosummary::

    ~scvi.model.MULTIVI.adata
    ~scvi.model.MULTIVI.adata_manager
    ~scvi.model.MULTIVI.device
    ~scvi.model.MULTIVI.get_normalized_function_name
    ~scvi.model.MULTIVI.history
    ~scvi.model.MULTIVI.is_trained
    ~scvi.model.MULTIVI.registry
    ~scvi.model.MULTIVI.summary_string
    ~scvi.model.MULTIVI.test_indices
    ~scvi.model.MULTIVI.train_indices
    ~scvi.model.MULTIVI.validation_indices





Methods table
~~~~~~~~~~~~~

.. autosummary::

    ~scvi.model.MULTIVI.convert_legacy_save
    ~scvi.model.MULTIVI.data_registry
    ~scvi.model.MULTIVI.deregister_manager
    ~scvi.model.MULTIVI.differential_accessibility
    ~scvi.model.MULTIVI.differential_expression
    ~scvi.model.MULTIVI.get_anndata_manager
    ~scvi.model.MULTIVI.get_elbo
    ~scvi.model.MULTIVI.get_from_registry
    ~scvi.model.MULTIVI.get_latent_representation
    ~scvi.model.MULTIVI.get_library_size_factors
    ~scvi.model.MULTIVI.get_marginal_ll
    ~scvi.model.MULTIVI.get_normalized_accessibility
    ~scvi.model.MULTIVI.get_normalized_expression
    ~scvi.model.MULTIVI.get_protein_foreground_probability
    ~scvi.model.MULTIVI.get_reconstruction_error
    ~scvi.model.MULTIVI.get_region_factors
    ~scvi.model.MULTIVI.get_setup_arg
    ~scvi.model.MULTIVI.get_state_registry
    ~scvi.model.MULTIVI.get_var_names
    ~scvi.model.MULTIVI.load
    ~scvi.model.MULTIVI.load_query_data
    ~scvi.model.MULTIVI.load_registry
    ~scvi.model.MULTIVI.prepare_query_anndata
    ~scvi.model.MULTIVI.prepare_query_mudata
    ~scvi.model.MULTIVI.register_manager
    ~scvi.model.MULTIVI.save
    ~scvi.model.MULTIVI.setup_anndata
    ~scvi.model.MULTIVI.setup_mudata
    ~scvi.model.MULTIVI.to_device
    ~scvi.model.MULTIVI.train
    ~scvi.model.MULTIVI.transfer_fields
    ~scvi.model.MULTIVI.update_setup_method_args
    ~scvi.model.MULTIVI.view_anndata_setup
    ~scvi.model.MULTIVI.view_registry
    ~scvi.model.MULTIVI.view_setup_args
    ~scvi.model.MULTIVI.view_setup_method_args





Attributes
~~~~~~~~~~~



.. autoattribute:: MULTIVI.adata

.. autoattribute:: MULTIVI.adata_manager

.. autoattribute:: MULTIVI.device

.. autoattribute:: MULTIVI.get_normalized_function_name

.. autoattribute:: MULTIVI.history

.. autoattribute:: MULTIVI.is_trained

.. autoattribute:: MULTIVI.registry

.. autoattribute:: MULTIVI.summary_string

.. autoattribute:: MULTIVI.test_indices

.. autoattribute:: MULTIVI.train_indices

.. autoattribute:: MULTIVI.validation_indices






Methods
~~~~~~~



.. automethod:: MULTIVI.convert_legacy_save

.. automethod:: MULTIVI.data_registry

.. automethod:: MULTIVI.deregister_manager

.. automethod:: MULTIVI.differential_accessibility

.. automethod:: MULTIVI.differential_expression

.. automethod:: MULTIVI.get_anndata_manager

.. automethod:: MULTIVI.get_elbo

.. automethod:: MULTIVI.get_from_registry

.. automethod:: MULTIVI.get_latent_representation

.. automethod:: MULTIVI.get_library_size_factors

.. automethod:: MULTIVI.get_marginal_ll

.. automethod:: MULTIVI.get_normalized_accessibility

.. automethod:: MULTIVI.get_normalized_expression

.. automethod:: MULTIVI.get_protein_foreground_probability

.. automethod:: MULTIVI.get_reconstruction_error

.. automethod:: MULTIVI.get_region_factors

.. automethod:: MULTIVI.get_setup_arg

.. automethod:: MULTIVI.get_state_registry

.. automethod:: MULTIVI.get_var_names

.. automethod:: MULTIVI.load

.. automethod:: MULTIVI.load_query_data

.. automethod:: MULTIVI.load_registry

.. automethod:: MULTIVI.prepare_query_anndata

.. automethod:: MULTIVI.prepare_query_mudata

.. automethod:: MULTIVI.register_manager

.. automethod:: MULTIVI.save

.. automethod:: MULTIVI.setup_anndata

.. automethod:: MULTIVI.setup_mudata

.. automethod:: MULTIVI.to_device

.. automethod:: MULTIVI.train

.. automethod:: MULTIVI.transfer_fields

.. automethod:: MULTIVI.update_setup_method_args

.. automethod:: MULTIVI.view_anndata_setup

.. automethod:: MULTIVI.view_registry

.. automethod:: MULTIVI.view_setup_args

.. automethod:: MULTIVI.view_setup_method_args