New in 0.14.4 (2021-11-16)

Bug fixes, some tutorial improvements.

Changes

  • kl_weight handling for Pyro-based models (#1242).

  • Allow override of missing protein inference in TOTALVI (#1251). This allows to treat all 0s in a particular batch for one protein as biologically valid.

  • Fix load documentation (e.g., load(), load()) (#1253).

  • Fix model history on load with Pyro-based models (#1255).

  • Model construction tutorial uses new static setup anndata (#1257).

  • Add codebase overview figure to docs (#1231).