scvi.data.read_text

scvi.data.read_text(filename, delimiter=None, *, first_column_names=None, dtype='float32')

Read .txt, .tab, .data (text) file.

Same as read_csv() but with default delimiter None.

Parameters:

• filename (PathLike[str] | str | Iterator[str]) – Data file, filename or stream.

• delimiter (str | None (default: None)) – Delimiter that separates data within text file. If None, will split at arbitrary number of white spaces, which is different from enforcing splitting at single white space ‘ ‘.

• first_column_names (bool | None (default: None)) – Assume the first column stores row names.

• dtype (str (default: 'float32')) – Numpy data type.

Return type:

AnnData