Development

This section features tutorials to guide through the construction of a model with scvi-tools. For an example of how scvi-tools can be used in an independent package, see the simple-scvi [example].

Note

For questions about developing with scvi-tools, please use the [forum] or [zulip].

• Data handling in scvi-tools
• Constructing a probabilistic module
• Constructing a high-level model

Data handling in scvi-tools

Learn about how data is handled in scvi-tools

Development

Constructing a probabilistic module

Implement a novel statistical method for single-cell omics data as a module

Development

Constructing a high-level model

Implement an scvi-tools model class to provide a convenient interface for the lower-level module objects

Development