Common Modelling Use Cases# Preprocessing datasets for analysis with scvi-tools Model hyperparameter tuning with scVI Minification Using SHAP values and IntegratedGradients for cell type classification interpretability Train a scVI model using multiGPU Preprocessing datasets for analysis with scvi-tools Learn how to preprocess various types of data for use with scvi-tools models. Common Modelling Use Cases Model hyperparameter tuning with scVI Automatically find optimal set of hyperparameters using autotune. Common Modelling Use Cases Minification Minify a dataset by replacing count data with the model’s estimated parameters of the latent posterior distribution Common Modelling Use Cases Using SHAP values and IntegratedGradients for cell type classification interpretability Use integrated gradient or SHAP values for model explainability Common Modelling Use Cases Train a scVI model using multiGPU Example of how to train an SCVI model using multi GPU settings Common Modelling Use Cases
