scvi.data.prefrontalcortex_starmap#
- scvi.data.prefrontalcortex_starmap(save_path='data/')[source]#
Loads a starMAP dataset of mouse pre-frontal cortex (Wang et al., 2018).
3,704 cells and 166 genes.
- Parameters:
save_path (
str(default:'data/')) – Location to use when saving/loading the data.- Return type:
- Returns:
AnnData with batch info (
.obs['batch']), label info (.obs['labels']), spatial info (.obs['x_coord'],.obs['y_coord'])
Examples
>>> import scvi >>> adata = scvi.data.prefrontalcortex_starmap()